MTHFD1L and One-Carbon Metabolism: What Your Genotype Means for Methylation, Nucleotide Synthesis, and Health
The MTHFD1L gene produces a mitochondrial enzyme that plays a key role in formate production and the mitochondrial arm of one-carbon metabolism. Formate is exported from mitochondria to the cytoplasm where it helps generate 10-formyl-THF for purine and nucleotide synthesis and 5-MTHF for remethylation of homocysteine to methionine. Through this linkage, MTHFD1L influences availability of S-adenosylmethionine or SAMe, which is central to DNA methylation, epigenetic regulation, neurotransmitter production, and many detoxification pathways.
Genetic changes that reduce MTHFD1L function can limit mitochondrial formate output, creating a bottleneck in one-carbon supply. That can slow the methylation cycle and stress nucleotide production, especially during periods of high demand such as rapid cell growth, pregnancy, inflammation, or low nutrient intake. Conversely, typical MTHFD1L activity helps keep nucleotide synthesis and methylation running efficiently, supporting genomic stability and healthy cell replication.
How we use this information
This article explains what different genotypes at rs11754661 mean for MTHFD1L activity, what health considerations may be relevant, and practical diet, supplement, lifestyle, and testing suggestions you can discuss with your healthcare provider. PlexusDx does not provide medical advice. Always consult your healthcare provider before making changes to diet, supplements, or medications.
Genetic interpretation
2 effect alleles (AA) — reduced MTHFD1L activity
The AA genotype at rs11754661 has been associated with reduced MTHFD1L function and potentially lower mitochondrial formate output. Reduced formate can narrow the flow of one-carbon units to the cytosolic folate cycle and lower production of 5-MTHF, which may limit remethylation of homocysteine to methionine and reduce SAMe availability. This can affect DNA methylation, nucleotide synthesis, and processes that rely on methyl donors.
Considerations
- Maintain strong folate and B12 status to support downstream methylation.
- Support serine and glycine availability since mitochondrial serine catabolism helps supply formate.
- Monitor homocysteine if clinically indicated to assess methylation stress.
- Focus on nutrient-dense diet and lifestyle practices that support mitochondrial health.
1 effect allele (AG) — moderately altered MTHFD1L activity
The AG genotype is associated with a moderate change in mitochondrial formate production. In everyday conditions you may function normally, but during higher metabolic demand or with low folate intake the limited one-carbon supply could become more relevant.
Considerations
- Ensure sufficient dietary folate, B12, and amino acids that feed one-carbon metabolism.
- Support serine and glycine flux and consider lifestyle steps to protect mitochondrial function.
- Be attentive to periods of increased demand such as pregnancy, intense training, or illness.
0 effect alleles (GG) — typical MTHFD1L activity
The GG genotype is associated with expected or typical MTHFD1L activity and steady mitochondrial formate export. With this genotype the folate cycle generally receives normal one-carbon input for nucleotide synthesis and methyl-donor regeneration, assuming adequate nutrient status and mitochondrial health.
Considerations
- Maintain balanced intake of folate, B12, and serine/glycine to support ongoing methylation and nucleotide needs.
- Follow general healthy lifestyle practices to preserve mitochondrial and overall metabolic resilience.
Dietary recommendations
- Prioritize natural folate rich foods: dark leafy greens, asparagus, Brussels sprouts, lentils, chickpeas, and liver if appropriate. Natural folate supports 5-MTHF and folate cycle flux.
- Include vitamin B12 sources: seafood, fish, poultry, eggs, dairy, or fortified foods. If you follow a vegetarian or vegan diet consider B12 supplementation after testing.
- Boost serine and glycine precursors: protein-rich foods such as poultry, eggs, fish, soy, legumes, and seeds provide amino acids that feed one-carbon metabolism. Bone broths and gelatinous cuts supply glycine.
- Consume choline and betaine containing foods: eggs, soy, broccoli, quinoa, and beets. Choline and betaine can donate methyl groups and support homocysteine remethylation.
- Limit excess alcohol: alcohol impairs folate absorption and methylation processes.
Supplement recommendations (discuss with your provider)
- Folate as methylfolate (5-MTHF) or a balanced folate form: supports cytosolic folate pools and remethylation. People with limited mitochondrial formate output may benefit from ensuring adequate active folate availability.
- Vitamin B12 as methylcobalamin or hydroxocobalamin: supports methionine synthase and remethylation of homocysteine.
- B-complex and cofactors: B2 riboflavin and B6 pyridoxine support enzymes in one-carbon metabolism and transsulfuration pathways.
- Betaine (trimethylglycine) or choline: alternative methyl donor pathways can help maintain methylation when folate dependent remethylation is challenged.
- Mitochondrial support nutrients: coenzyme Q10, alpha lipoic acid, magnesium, and adequate dietary protein may support mitochondrial function and one-carbon flux indirectly.
- Do not self-prescribe high dose supplements without medical oversight. Discuss appropriate forms and dosages with your healthcare provider, especially during pregnancy, lactation, or when taking medications.
Lifestyle and testing considerations
- Measure plasma homocysteine and B12/folate status if you or your clinician are concerned about methylation stress. Trends over time are often more informative than a single snapshot.
- Prioritize regular physical activity and resistance training which support mitochondrial biogenesis and metabolic flexibility.
- Get consistent, restorative sleep. Sleep deprivation impairs metabolic and mitochondrial function.
- Manage chronic stress through behavior strategies such as mindfulness, breathing exercises, or counseling. Chronic stress can raise metabolic demand and alter methylation requirements.
- Avoid smoking and reduce exposure to environmental toxins that increase demand on methylation and detoxification pathways.
- During pregnancy or planned conception, coordinate with your healthcare provider to ensure appropriate folate and B12 support given increased nucleotide and methylation demands.
When to talk to your healthcare provider
- If lab tests show elevated homocysteine, low B12, or low folate you should follow up with your clinician to determine cause and treatment.
- If you are pregnant, trying to conceive, or on medications that affect folate or B12 status discuss personalized supplementation strategies.
- If you plan to begin supplements such as methylfolate, high dose B12, betaine, or mitochondrial-targeted therapies consult your healthcare provider to check for interactions and appropriate dosing.
Final notes and disclaimer
This information is educational and intended to help you understand how MTHFD1L variation can affect one-carbon metabolism, methylation, and related nutrient needs. PlexusDx does not provide medical advice. Always consult your healthcare provider before starting or stopping supplements, making significant dietary changes, or adjusting medical treatments. Your healthcare provider can interpret genetic results in context of your medical history, current labs, medications, and personal goals.

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